feat: mpr doing

This commit is contained in:
mozzie 2023-12-20 17:02:33 +08:00
parent 5008849d82
commit c73fdb6a6d
15 changed files with 514 additions and 36 deletions

View File

@ -29,10 +29,11 @@
"pako": "2.1.0", "pako": "2.1.0",
"@kitware/vtk.js": "29.2.0", "@kitware/vtk.js": "29.2.0",
"@cornerstonejs/dicom-image-loader": "1.41.0", "@cornerstonejs/dicom-image-loader": "1.41.0",
"cornerstone-wado-image-loader": "4.13.2",
"@cornerstonejs/core": "1.41.0", "@cornerstonejs/core": "1.41.0",
"dcmjs": "0.30.0", "dcmjs": "0.30.0",
"dicomweb-client": "0.10.3" "dicomweb-client": "0.10.3",
"@cornerstonejs/tools": "3.0.2",
"@cornerstonejs/streaming-image-volume-loader": "1.41.0"
}, },
"devDependencies": { "devDependencies": {
"@babel/core": "^7.21.8", "@babel/core": "^7.21.8",

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@ -0,0 +1,10 @@
import { initCornerstoneDICOMImageLoader } from "./initCornerstoneDicomImageLoader";
import initVolumeLoader from "./initVolumeLoader";
import { init as csRenderInit } from "@cornerstonejs/core";
// 入口
export const initCornerstone = async () => {
initCornerstoneDICOMImageLoader();
initVolumeLoader();
await csRenderInit();
};

View File

@ -1,9 +1,8 @@
import { init as csRenderInit } from "@cornerstonejs/core";
import dicomParser from "dicom-parser"; import dicomParser from "dicom-parser";
import * as cornerstone from "@cornerstonejs/core"; import * as cornerstone from "@cornerstonejs/core";
import cornerstoneDICOMImageLoader from "@cornerstonejs/dicom-image-loader"; import cornerstoneDICOMImageLoader from "@cornerstonejs/dicom-image-loader";
const initCornerstoneDICOMImageLoader = () => { export const initCornerstoneDICOMImageLoader = () => {
const { preferSizeOverAccuracy, useNorm16Texture } = const { preferSizeOverAccuracy, useNorm16Texture } =
cornerstone.getConfiguration().rendering; cornerstone.getConfiguration().rendering;
@ -30,8 +29,3 @@ const initCornerstoneDICOMImageLoader = () => {
cornerstoneDICOMImageLoader.webWorkerManager.initialize(config); cornerstoneDICOMImageLoader.webWorkerManager.initialize(config);
}; };
export const initCornerstone = async () => {
initCornerstoneDICOMImageLoader();
await csRenderInit();
};

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@ -0,0 +1,17 @@
import * as cornerstone from "@cornerstonejs/core";
import ptScalingMetaDataProvider from "./ptScalingMetaDataProvider";
const { calibratedPixelSpacingMetadataProvider } = cornerstone.utilities;
export default function initProviders() {
cornerstone.metaData.addProvider(
ptScalingMetaDataProvider.get.bind(ptScalingMetaDataProvider),
10000
);
cornerstone.metaData.addProvider(
calibratedPixelSpacingMetadataProvider.get.bind(
calibratedPixelSpacingMetadataProvider
),
11000
);
}

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@ -0,0 +1,19 @@
import { volumeLoader } from "@cornerstonejs/core";
import {
cornerstoneStreamingImageVolumeLoader,
cornerstoneStreamingDynamicImageVolumeLoader,
} from "@cornerstonejs/streaming-image-volume-loader";
export default function initVolumeLoader() {
volumeLoader.registerUnknownVolumeLoader(
cornerstoneStreamingImageVolumeLoader
);
volumeLoader.registerVolumeLoader(
"cornerstoneStreamingImageVolume",
cornerstoneStreamingImageVolumeLoader
);
volumeLoader.registerVolumeLoader(
"cornerstoneStreamingDynamicImageVolume",
cornerstoneStreamingDynamicImageVolumeLoader
);
}

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@ -0,0 +1,17 @@
import { utilities as csUtils } from "@cornerstonejs/core";
const scalingPerImageId = {};
function addInstance(imageId, scalingMetaData) {
const imageURI = csUtils.imageIdToURI(imageId);
scalingPerImageId[imageURI] = scalingMetaData;
}
function get(type, imageId) {
if (type === "scalingModule") {
const imageURI = csUtils.imageIdToURI(imageId);
return scalingPerImageId[imageURI];
}
}
export default { addInstance, get };

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@ -0,0 +1,146 @@
import {
Enums,
RenderingEngine,
setVolumesForViewports,
volumeLoader,
} from "@cornerstonejs/core";
import { createImageIdsAndCacheMetaData } from "../CornerstoneDicomLoader/createImageIdsAndCacheMetaData";
import { initCornerstone } from "../CornerstoneDicomLoader/init";
import { useEffect, useRef } from "react";
import * as cornerstoneTools from "@cornerstonejs/tools";
import { PublicViewportInput } from "@cornerstonejs/core/dist/types/types";
import { setCtTransferFunctionForVolumeActor } from "./setCtTransferFunctionForVolumeActor";
interface CorsshairProps {
children?: JSX.Element;
}
const {
ToolGroupManager,
Enums: csToolsEnums,
CrosshairsTool,
StackScrollMouseWheelTool,
} = cornerstoneTools;
const toolGroupId = "MY_TOOLGROUP_ID";
const volumeName = "CT_VOLUME_ID"; // Id of the volume less loader prefix
const volumeLoaderScheme = "cornerstoneStreamingImageVolume"; // Loader id which defines which volume loader to use
const volumeId = `${volumeLoaderScheme}:${volumeName}`; // VolumeId with loader id + volume id
const renderingEngineId = "myRenderingEngine";
const viewportA = "CT_AXIAL";
const viewportB = "CT_SAGITTAL";
const viewportC = "CT_CORONAL";
const viewportColors = {
[viewportA]: "rgb(200, 0, 0)",
[viewportB]: "rgb(200, 200, 0)",
[viewportC]: "rgb(0, 200, 0)",
};
const { ViewportType } = Enums;
const StudyInstanceUID =
"1.2.840.113564.345049290535.9692.637552042156233117.433089";
const SeriesInstanceUID =
"1.3.12.2.1107.5.1.4.76315.30000021042706150001900118311";
export const Corsshair = (props: CorsshairProps) => {
const viewportA = useRef(null);
const viewportB = useRef(null);
const viewportC = useRef(null);
const run = async () => {
await initCornerstone();
// Get Cornerstone imageIds and fetch metadata into RAM
const imageIds = await createImageIdsAndCacheMetaData({
StudyInstanceUID,
SeriesInstanceUID,
wadoRsRoot: "/dicom-web",
});
const volume = await volumeLoader.createAndCacheVolume(volumeId, {
imageIds,
});
console.log(volume)
// Instantiate a rendering engine
// const renderingEngine = new RenderingEngine(renderingEngineId);
// if (viewportA.current && viewportB.current && viewportC.current) {
// // Create the viewports
// const viewportInputArray: PublicViewportInput[] = [
// {
// viewportId: viewportA.current,
// type: ViewportType.ORTHOGRAPHIC,
// element: viewportA.current,
// defaultOptions: {
// orientation: Enums.OrientationAxis.AXIAL,
// background: [0, 0, 0],
// },
// },
// {
// viewportId: viewportB.current,
// type: ViewportType.ORTHOGRAPHIC,
// element: viewportB.current,
// defaultOptions: {
// orientation: Enums.OrientationAxis.SAGITTAL,
// background: [0, 0, 0],
// },
// },
// {
// viewportId: viewportC.current,
// type: ViewportType.ORTHOGRAPHIC,
// element: viewportC.current,
// defaultOptions: {
// orientation: Enums.OrientationAxis.CORONAL,
// background: [0, 0, 0],
// },
// },
// ];
// renderingEngine.setViewports(viewportInputArray);
// volume.load();
// await setVolumesForViewports(
// renderingEngine,
// [
// {
// volumeId,
// callback: () => setCtTransferFunctionForVolumeActor,
// },
// ],
// [viewportA.current!, viewportB.current!, viewportC.current!]
// );
// // Render the image
// renderingEngine.renderViewports([
// viewportA.current!,
// viewportB.current!,
// viewportC.current!,
// ]);
// }
};
useEffect(() => {
run();
}, []);
return (
<div
style={{
display: "flex",
justifyContent: "space-evenly",
gap: 20,
height: 300,
}}
>
<div ref={viewportA}></div>
<div ref={viewportB}></div>
<div ref={viewportC}></div>
</div>
);
};

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@ -0,0 +1,20 @@
import { VolumeActor } from "@cornerstonejs/core/dist/types/types";
const windowWidth = 400;
const windowCenter = 40;
const lower = windowCenter - windowWidth / 2.0;
const upper = windowCenter + windowWidth / 2.0;
export const ctVoiRange = { lower, upper };
export const setCtTransferFunctionForVolumeActor = ({
volumeActor,
}: {
volumeActor: VolumeActor;
}) => {
volumeActor
.getProperty()
.getRGBTransferFunction(0)
.setMappingRange(lower, upper);
};

View File

@ -1,7 +1,7 @@
import { useEffect, useRef } from "react"; import { useEffect, useRef } from "react";
import { Enums, RenderingEngine, cache } from "@cornerstonejs/core"; import { Enums, RenderingEngine, cache } from "@cornerstonejs/core";
import { initCornerstone } from "./initCornerstoneDicomImageLoader"; import { initCornerstone } from "../CornerstoneDicomLoader/initCornerstoneDicomImageLoader";
import { createImageIdsAndCacheMetaData } from "./createImageIdsAndCacheMetaData"; import { createImageIdsAndCacheMetaData } from "../CornerstoneDicomLoader/createImageIdsAndCacheMetaData";
import { import {
IStackViewport, IStackViewport,
PublicViewportInput, PublicViewportInput,

View File

@ -1,3 +1,4 @@
import { Corsshair } from "./Crosshair";
import { DiffViewer } from "./DiffViewer"; import { DiffViewer } from "./DiffViewer";
import { MprViewer } from "./MprViewer"; import { MprViewer } from "./MprViewer";
import { VolumeViewer } from "./VolumeViewer"; import { VolumeViewer } from "./VolumeViewer";
@ -9,7 +10,7 @@ interface RootViewerProps {
export const RootViewer = (props: RootViewerProps) => { export const RootViewer = (props: RootViewerProps) => {
return ( return (
<div> <div>
<VolumeViewer /> <Corsshair />
</div> </div>
); );
}; };

View File

@ -20,6 +20,12 @@ importers:
'@cornerstonejs/dicom-image-loader': '@cornerstonejs/dicom-image-loader':
specifier: 1.41.0 specifier: 1.41.0
version: 192.168.4.201+4873/@cornerstonejs/dicom-image-loader@1.41.0(@babel/preset-env@7.21.5)(autoprefixer@10.4.15)(webpack@5.75.0)(wslink@1.11.4) version: 192.168.4.201+4873/@cornerstonejs/dicom-image-loader@1.41.0(@babel/preset-env@7.21.5)(autoprefixer@10.4.15)(webpack@5.75.0)(wslink@1.11.4)
'@cornerstonejs/streaming-image-volume-loader':
specifier: 1.41.0
version: 1.41.0(@babel/preset-env@7.21.5)(autoprefixer@10.4.15)(webpack@5.75.0)(wslink@1.11.4)
'@cornerstonejs/tools':
specifier: 3.0.2
version: 3.0.2
'@kitware/vtk.js': '@kitware/vtk.js':
specifier: 29.2.0 specifier: 29.2.0
version: 192.168.4.201+4873/@kitware/vtk.js@29.2.0(@babel/preset-env@7.21.5)(autoprefixer@10.4.15)(webpack@5.75.0)(wslink@1.11.4) version: 192.168.4.201+4873/@kitware/vtk.js@29.2.0(@babel/preset-env@7.21.5)(autoprefixer@10.4.15)(webpack@5.75.0)(wslink@1.11.4)
@ -2966,6 +2972,19 @@ packages:
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dev: false dev: false
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dependencies:
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engines: {node: '>=6.9.0'} engines: {node: '>=6.9.0'}
@ -3202,6 +3221,41 @@ packages:
dev: true dev: true
optional: true optional: true
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dependencies:
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comlink: 4.4.1
detect-gpu: 5.0.37
gl-matrix: 3.4.3
lodash.clonedeep: 4.5.0
transitivePeerDependencies:
- '@babel/preset-env'
- autoprefixer
- webpack
- wslink
dev: false
/@cornerstonejs/streaming-image-volume-loader@1.41.0(@babel/preset-env@7.21.5)(autoprefixer@10.4.15)(webpack@5.75.0)(wslink@1.11.4):
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dependencies:
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comlink: 4.4.1
transitivePeerDependencies:
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- autoprefixer
- webpack
- wslink
dev: false
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deprecated: Use cornerstone-tools instead if you are looking for cornerstone legacy, this package name will be reused for cornerstone3d tools soon
dependencies:
'@babel/runtime': 7.1.2
cornerstone-math: 0.1.10
dev: false
/@cspotcode/source-map-support@0.8.1: /@cspotcode/source-map-support@0.8.1:
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engines: {node: '>=12'} engines: {node: '>=12'}
@ -3538,6 +3592,36 @@ packages:
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'@jridgewell/sourcemap-codec': 1.4.15 '@jridgewell/sourcemap-codec': 1.4.15
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hasBin: true
peerDependencies:
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autoprefixer: ^10.4.7
wslink: ^1.1.0
dependencies:
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commander: 9.2.0
d3-scale: 4.0.2
fast-deep-equal: 3.1.3
fflate: 0.7.3
gl-matrix: 3.4.3
globalthis: 1.0.3
seedrandom: 3.0.5
shader-loader: 1.3.1
shelljs: 0.8.5
spark-md5: 3.0.2
stream-browserify: 3.0.0
webworker-promise: 0.5.0
worker-loader: 3.0.8(webpack@5.75.0)
wslink: 1.11.4
xmlbuilder2: 3.0.2
transitivePeerDependencies:
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dev: false
/@leichtgewicht/ip-codec@2.0.4: /@leichtgewicht/ip-codec@2.0.4:
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@ -3548,7 +3632,7 @@ packages:
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dependencies: dependencies:
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'@types/node': 12.20.55 '@types/node': 12.20.55
find-up: 4.1.0 find-up: 4.1.0
fs-extra: 8.1.0 fs-extra: 8.1.0
@ -4091,6 +4175,35 @@ packages:
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engines: {node: '>= 10.13'} engines: {node: '>= 10.13'}
@ -4168,7 +4281,7 @@ packages:
react: '>=16.9.0' react: '>=16.9.0'
react-dom: '>=16.9.0' react-dom: '>=16.9.0'
dependencies: dependencies:
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rc-util: 5.37.0(react-dom@18.2.0)(react@18.2.0) rc-util: 5.37.0(react-dom@18.2.0)(react@18.2.0)
react: 18.2.0 react: 18.2.0
react-dom: 18.2.0(react@18.2.0) react-dom: 18.2.0(react@18.2.0)
@ -4178,7 +4291,7 @@ packages:
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/@rc-component/mutate-observer@1.1.0(react-dom@18.2.0)(react@18.2.0): /@rc-component/mutate-observer@1.1.0(react-dom@18.2.0)(react@18.2.0):
@ -4202,7 +4315,7 @@ packages:
react: '>=16.9.0' react: '>=16.9.0'
react-dom: '>=16.9.0' react-dom: '>=16.9.0'
dependencies: dependencies:
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classnames: 2.3.2 classnames: 2.3.2
rc-util: 5.37.0(react-dom@18.2.0)(react@18.2.0) rc-util: 5.37.0(react-dom@18.2.0)(react@18.2.0)
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@ -9021,7 +9219,6 @@ packages:
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emojis-list: 3.0.0 emojis-list: 3.0.0
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react-dom: '>=16.9.0' react-dom: '>=16.9.0'
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react-dom: '>=16.9.0' react-dom: '>=16.9.0'
dependencies: dependencies:
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react-dom: '*' react-dom: '*'
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classnames: 2.3.2 classnames: 2.3.2
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dependencies: dependencies:
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dev: true
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requiresBuild: true
dev: false
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dev: false dev: false
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@ -12082,6 +12290,12 @@ packages:
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dev: false dev: false
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dependencies:
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dev: false
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engines: {node: '>=8'} engines: {node: '>=8'}
@ -12121,7 +12335,6 @@ packages:
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interpret: 1.4.0 interpret: 1.4.0
rechoir: 0.6.2 rechoir: 0.6.2
dev: true
/side-channel@1.0.4: /side-channel@1.0.4:
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@ -12217,6 +12430,10 @@ packages:
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dev: true dev: true
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dev: false
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dev: true
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dependencies:
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readable-stream: 3.6.2
dev: false
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@ -13525,6 +13748,10 @@ packages:
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engines: {node: '>=12'} engines: {node: '>=12'}
@ -13895,6 +14126,17 @@ packages:
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dev: true dev: true
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engines: {node: '>= 10.13.0'}
peerDependencies:
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dependencies:
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schema-utils: 3.3.0
webpack: 5.75.0(webpack-cli@5.0.2)
dev: false
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